2 Complex Networks Pakages for MatLab:  MIT  LevMuchnik

        10 Best Visualization Projects of the Year 2010     

        AT&T Labs Research - Software Tools

        BioGRID - Biological General Repository for Interaction Datasets

        Boost - C++ Graph Libraries

        Brain Maps - Nodes3D

        CCVisu - Tool for Visual Graph Clustering and General Force-Directed Graph Layout

        CFinder - Clusters & Communities

        CiteSpace - Visualizing Patterns and Trends in Scientific Literature

        Collection of Complex Networks - Complex Networks Modeling and Data

        Complex Networks - Databases of Complex Networks

        Complex Networks Resources (NIST) - Complex Networks Data Sets

        Cooperative Association for Internet Data Analysis (CAIDA) - The Cooperative Association for Internet Data Analysis

            Otter - Tool for Topology Display

            Walrus - Graph Visualization Tool

        CrawDad - Metadata

        Cytoscape - An Open Source Platform for Complex-Network Analysis and Visualization

        DataToolX - DataTollX Projects

        DFMC - Flow Graph Visualization

        DIP - Databese of Interacting Proteins

        DDLab - Discrete Dynamics Lab

        Edge - Serpentine Gallery

        Found In Space - 3-dimensional Relation Display

        GDT - Graph Drawing Toolkit

        gem3Ddraw - 3D Draw Software

        Gephi - Open Graph Viz Platform

        Graph Layout - ETH

        Graph Visualisation - Dynamic User-defined Information Visualisation

        Graph Visualization - Tools

        Graph Visualization - Tools for Rapid Understanding of Scientific Literature

        Graph Visualization Library - NYU

        Graphviz - Graph Visualization Software

                   GraphViz4Matlab - MATLAB interface to GraphViz

        GRINEdit - Tools and Libraries for Graph, Relation, Interaction and Network

        GUESS - Graph Exploration System

        GVF - Graph Visualization Framework

        Hierarchical Characterization of Complex Networks - Applicative Software and Information Resources

        HyperGraph - Open Source Java Code

        Idiagram - Visual Modeling for Complex Business Problems

        igraph - Free Software Package for Creating and Manipulating Undirected and Directed Graphs

        InfoMine - General Visualization, Graph Visualization or Interface

        Internet 2 Network NOC - Historial Abilene Data

        Internet Topology Generators - Network Simulator ns-2

                 BRITE   Inet  Waxman

        Internet World Stats - World Internet Usage and Population Statistics

                 Internet Stats Today - World Internet Usage Statistics

        IQSS Dataverse Network, Harvard - Collection of Social Science Research Data

        IRL UCLA - Internet Topology Collection

        IVC - A Data-Code-Compute Resource for Information Visualization

        JUNG  -  Java Universal Network/Graph Framework

                RDF Gravity - Graph Visualization Tool

        Kegg Brite Database - Collection of Hierarchical Classifications

        KrackPlot - A Social Network Visualization Program

        Libbvg - Boldi-Vigna Graph Compression Library

        LinLogLayout - Program for Computing Graph Layouts

        Mage 3D Biochem -3D Interactive Garphics

        Manageability - Open Source Graph or Network Visualization Written in Java

        Mascopt - Tools for Network Optimization

        METIS - Family of Graph and Hypergraph Partitioning Software

        mfinder/mDraw - Network Motifs Detection Tool / Network Visualization Tool

        MGL - Matlab Graph Library

        Muchnik - Complex Network Package and More

        Munzner - Interactive Visualization of Large Graphs and Networks

                  Software Collection

        Negopy - Network Analysis Program

        Net - Statistical Mechanics of Complex Systems

        NetEvo - Tools for Complex Dynamical Network Evolution

        NetLogo - Multi-agent programmable modeling environment

        NetMiner - Social Network Analysis Software

        NetVis - Dynamic Visualization of Social Networks

        NetWiki - A Space for Collecting Data and Collaborating on Research

        Network Analysis Programs - Programs for PC/DOS with Test Data

        Network Analysis Software - Social Network Analysis Software

        Network Data - Network Data Sets in GML Format

        Network Databases - Resources for Network Topologies

        Network Workbench - A Large-Scale Network Analysis, Modeling and Visualization Toolkit

        NetworkX - High Productivity Software for Complex Networks

        NodeXL - Network Overview, Discovery and Exploration for Excel

        Osprey - Software Platform for Visualization of Complex Interaction Networks

        Pajek - Program for Large Network Analysis

              Pajek Datasets

        P.I.G.A.L.E. - Public Implementation of a Graph Algorithm Library and Editor
  
      Prefuse - Java Visualization Toolkit

        Radatools - Windows and Linux Programs to Analyze Complex Networks

        Resources in Complex Networks

        RIPE - RIS Raw Data

        Route Service - Public Route Service List

        Routing Information Service (RIS) - A Project to Collect and Stores Internet Routing Data

              RIS Raw Data

        Route Views - Tools for Collection and Manipulation of Route-Views Data

        Shift-square Lanczos Method - Computing Eigenvalues of Large Graphs

        SNAP, Stanford - Large Network Dataset Collection

        Social Network Analysis & Semantic Network Analysis - Extracting Textual Data for SNA and SNA

        Softpedia - Encyclopedia of Free Software Downloads

        SourceForge - Free Open Source Software

        StocNet - Software for Statistical Analysis of Social Networks

        Tagora - Data Collection, Analysis and Mining

        Traceroute - Internet Routing Resources

               Using Traceroute

        Tulips - Graph Visualization Software

        UbiGraph - Visualizing Dynamic Graphs

        UCINET - Software for Social Network Analysis

        uDraw - Graphs Visualizations Using Automatic Layout

        VisMatrix - Sparse Matrix Visualization

        VLab - Complexity Virtual Lab

        VTK - Visualization Toolkit
                    Graph Visualization Library

        Webweb - A tool for creating interactive visualizations of networks on the web

        Wolfram Mathematica 9

        yED - Graph Editor

 

Archives

        GDEA - Graph Drawing E-print Archive

 

Companies 

         aiSee - Graph Visualization

         Analytic Technologies - Social Network Analysis Software

         Annas - Java Framework for Graph Theory

         Asterisq - Graph Visualization for the Web   

         IBM ILOG - Visualization for Java 

         IBM SPSS - Statistics 19 

         mxGraph - JavaScript Diagram Component
         Oreas - Insight through Visualization

         StatSoft - Statistica

         Tom Sawyer  - Data Visualization Software

         Visual Complexity - Software Company for Visualization of Complex Networks

         Visual Route - Traceroute and Network Diagnostic Tool

         Webdesigner Depot - 50 Great Examples of Data Visualization

         yFiles for Java - Java™ Class Library